Summarise percentage of tag intensities below a given threshold and missing

Given an MSnSet, return a data.frame summarising the percentage of tag intensities below a given threshold, missing values and the median tag intensity

get_psm_metrics(obj, threshold = 5.75, group_by_sample = FALSE)

Arguments

obj

MSnSet.

threshold

numeric. Minimum intensity threshold

group_by_sample

logical. Group the summaries by sample

Value

data.frame object.