The camprotR
package is an internal package written and used by the Cambridge Centre for Proteomics to facilitate our proteomic analyses. It is opinionated by design and most functions assume the data has been processed by Proteome Discoverer.
remotes::install_github("CambridgeCentreForProteomics/camprotR", dependencies = TRUE)
Vignettes which go through how to use different aspects of the package are available on the camprotR
website here (see Articles tab).