append_fasta.Rd
This function is used to add sequences from a FASTA file (file1) onto the end of another FASTA file (file2).
If file2 is a cRAP database, then you can optionally add cRAP numbers to the headers of file1, starting at the desired number e.g. cRAP127.
append_fasta(file1, file2, is_crap = FALSE, crap_start = 1)
character
, file path of FASTA to append
character
, file path of FASTA to append to
logical
, should cRAP numbers e.g. cRAP001, cRAP002, etc.
be added to sequence headers of file1? Default is FALSE
numeric
, what number should the cRAP00x start at?
Default is 1.
Overwrites FASTA file2 with some more sequences added to the end.
# Add some commercial protease sequences onto the end of CCP cRAP FASTA
if (FALSE) {
append_fasta(
file1 = "commercial-proteases.fasta",
file2 = "2021-01_CCP_cRAP.fasta",
is_crap = TRUE,
crap_start = 128
)
}